unit 2: nutrition and digestion, basic chemistry, organic compounds, enzyme function

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soshired  on January 23, 2010

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biology

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unit 2: nutrition and digestion, basic chemistry, organic compounds, enzyme function

Mouth
takes in food and mechanically and chemically breaks down matter
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Mouth takes in food and mechanically and chemically breaks down matter
gallbladder stores bile until it is needed in the small intestine
pharynx makes sure food goes down digestive tract and air into the esophagus
trachea conveys air to and from the lungs
epiglottis is depressed while swallowing to cover the entrance to the windpipe
small intestine runs between the stomach and the large intestine; nutrients are absobed into the blood here and chemical breakdown occurs
stomach links the esophagus to the small intestine; chemical breakdown occurs here
large intestine (colon) absorbs water and vitamin k from the alimentary canal
pancreas secretes digestive enzymes and does a lot of other stuff
appendix not important; contains a mass of white blood cells that helps with immunity
liver processes the products of digestion into substances useful to the body, neutralizes harmful substances in the blood, secretes bile for digestion of fats, synthesizes plasma proteins, stores things.
rectum where feces are stored until they can be eliminated
anus where solid waste matter leaves the body
element any substance that cannot be broken down to any other substance
compound a combination of two or more elements
atom the smallest unit of matter that retains the properties of an element
proton A subatomic particle with a single positive electrical charge, found in the nucleus of an atom
neutron An electrically neutral particle (a particle having no electrical charge), found in the nucleus of an atom
electron A subatomic particle with a single negative charge; one or more electrons move around the nucleus of an atom
nucleus (of an atom) An atom's central core, containing protons and neutrons
atomic number The number of protons in the nucleus of an atom, unique for each element and designated by a subscript to the left of the elemental symbol
mass number The sum of the number of protons and neutrons in an atom's nucleus
isotope One of several atomic forms of an element, each containing a different number of neutrons and thus differing in atomic mass
radioactive isotope An isotope that is unstable; the nucleus decays spontaneously, giving off detectable particles and energy
electron shell An energy level representing the distance of an electron from the nucleus of an atom
electronegativity The attraction of an atom for the electrons of a covalent bond
chemical bond An attraction between two atoms resulting from a sharing of outer-shell electrons or the presence of opposite charges on the atoms; the bonded atoms gain complete outer electron shells
ionic bond A chemical bond resulting from the attraction between oppositely charged ions
ion An atom that has gained or lost electrons, thus acquiring a charge
salt Compounds resulting from the formation of ionic bonds, also called an ionic compound
covalent bond A type of strong chemical bond in which two atoms share one pair of valence electrons
polar molecule A molecule (such as water) with opposite charges on opposite sides
hydrophilic likes water
hydrophobic not liking water
hydrogen bond A type of weak chemical bond formed when the slightly positive hydrogen atom of a polar covalent bond in one molecule is attracted to the slightly negative atom of a polar covalent bond in another molecule
nonpolar molecule Molecule which has no separation of charge, so no positive or negative poles are formed
cohesion The binding together of like molecules, often by hydrogen bonds
adhesion The attraction between different kinds of molecules
surface tension A measure of how difficult it is to stretch or break the surface of a liquid
evaporative cooling sweat on our skin evaporates with the wind causing cooling
heat The total amount of kinetic energy due to molecular motion in a body of matter
temperature A measure of the intensity of heat in degrees, reflecting the average kinetic energy of the molecules
density the degree of compactness of a substance
solute A substance that is dissolved in a solution
solvent The dissolving agent of a solution
solution A homogeneous, liquid mixture of two or more substances
acid A substance that increases the hydrogen ion concentration of a solution
base A substance that reduces the hydrogen ion concentration of a solution
buffer A substance that consists of acid and base forms in a solution and that minimizes changes in pH when extraneous acids or bases are added to the solution
pH scale A measure of hydrogen ion concentration equal to -log [H+] and ranging in value from 0 to 14
chemical reaction A process leading to chemical changes in matter; involves the making and/or breaking of chemical bonds
reactant A starting material in a chemical reaction
product An ending material in a chemical reaction
organic compound A chemical compound containing the element carbon and usually synthesized by cells
hydrocarbon An organic molecule consisting only of carbon and hydrogen
isomer One of several organic compounds with the same molecular formula but different structures and therefore different properties
functional group A specific configuration of atoms commonly attached to the carbon skeletons of organic molecules and usually involved in chemical reactions
hydroxyl A functional group consisting of a hydrogen atom joined to an oxygen atom by a polar covalent bond. Molecules possessing this group are soluble in water and are called alcohols
carbonyl A functional group present in aldehydes and ketones and consisting of a carbon atom double-bonded to an oxygen atom
carboxyl A functional group present in organic acids and consisting of a single carbon atom double-bonded to an oxygen atom and also bonded to a hydroxyl group
amino A functional group that consists of a nitrogen atom bonded to two hydrogen atoms; can act as a base in solution, accepting a hydrogen ion and acquiring a charge of +1
macromolecule A giant molecule formed by the joining of smaller molecules, usually by a condensation reaction
polymer A long molecule consisting of many similar or identical monomers linked together
monomer The subunit that serves as the building block of a polymer
dehydration synthesis A chemical process in which a polymer forms as monomers are linked by the removal of water molecules. One molecule of water is removed for each pair of monomers linked
hydrolysis A chemical process that lyses, or splits, molecules by the addition of water; an essential process in digestion
carbohydrate A sugar or one of its dimers or polymers
monosaccharide The simplest carbohydrate, active alone or serving as a monomer for disaccharides and polysaccharides
disaccharide A double sugar, consisting of two monosaccharides joined by dehydration synthesis
polysaccharide A polymer of up to over a thousand monosaccharides, formed by dehydration reactions
starch A storage polysaccharide in plants consisting entirely of glucose
glycogen An extensively branched glucose storage polysaccharide found in the liver and muscle of animals; the animal equivalent of starch
cellulose A structural polysaccharide of cell walls, consisting of glucose monomers joined by b-1, 4-glycosidic linkages
lipid One of a family of compounds, including fats, phospholipids, and steroids, that are insoluble in water
fat A biological compound consisting of three fatty acids linked to one glycerol molecule
triglyceride A fat, which consists of a molecule of glycerol linked to three fatty acids
unsaturated Pertaining to fats and fatty acids whose hydrocarbon chains lack the maximum number of hydrogen atoms and therefore have one or more double covalent bonds
saturated Pertaining to fats and fatty acids whose hydrocarbon chains contain the maximum number of hydrogens and therefore have no double covalent bonds
phospholipid A molecule that is a constituent of the inner bilayer of biological membranes, having a polar, hydrophilic head and a nonpolar, hydrophobic tail
wax A lipid that consists of one fatty acid linked to an alcohol
steroid A type of lipid characterized by a carbon skeleton consisting of four rings with various functional groups attached
protein A three-dimensional biological polymer constructed from a set of 20 different monomers called amino acids
enzyme A protein serving as a catalyst, a chemical agent that changes the rate of a reaction without being consumed by the reaction
amino acid An organic molecule possessing both carboxyl and amino groups
peptide bond The covalent bond between two amino acid units, formed by a dehydration reaction
polypeptide A polymer (chain) of many amino acids linked together by peptide bonds
denaturation For proteins, a process in which a protein unravels and loses its native conformation, thereby becoming biologically inactive
primary structure The level of protein structure referring to the specific sequence of amino acids
secondary structure The localized, repetitive coiling or folding of the polypeptide backbone of a protein due to hydrogen bond formation between peptide linkages
alpha helix A spiral shape constituting one form of the secondary structure of proteins, arising from a specific hydrogen-bonding structure
pleated sheet One form of the secondary structure of proteins in which the polypeptide chain folds back and forth, or where two regions of the chain lie parallel to each other and are held together by hydrogen bonds
tertiary structure Irregular contortions of a protein molecule due to interactions of side chains involved in hydrophobic interactions, ionic bonds, hydrogen bonds, and disulfide bridges
quaternary structure The particular shape of a complex, aggregate protein, defined by the characteristic three-dimensional arrangement of its constituent subunits, each a polypeptide
nucleic acid A polymer consisting of many nucleotide monomers; serves as a blueprint for proteins and, through the actions of proteins, for all cellular activity
DNA A double-stranded, helical nucleic acid molecule capable of replicating and determining the inherited structure of a cell's proteins
nucleotide The building block of a nucleic acid, consisting of a five-carbon sugar covalently bonded to a nitrogenous base and a phosphate group
double helix The form of native DNA, referring to its two adjacent polynucleotide strands wound into a spiral shape
kinetic energy The energy of motion, which is directly related to the speed of that motion
heat The total amount of kinetic energy due to molecular motion in a body of matter
potential energy The energy stored by matter as a result of its location or spatial arrangement
chemical energy Energy stored in the chemical bonds of molecules; a form of potential energy
endergonic A nonspontaneous chemical reaction in which free energy is absorbed from the surroundings
exergonic A spontaneous chemical reaction in which there is a net release of free energy
energy of activation The amount of energy that reactants must absorb before a chemical reaction will start
enzyme A protein serving as a catalyst, a chemical agent that changes the rate of a reaction without being consumed by the reaction
substrate The reactant on which an enzyme works
active site The specific portion of an enzyme that attaches to the substrate by means of weak chemical bonds
inhibitor A substance that reduces the activity of an enzyme by entering the active site in place of the substrate whose structure it mimics
omnivore eats meat and plants
herbivore eats only plants
carnivore eats only meat
ingestion A heterotrophic mode of nutrition in which other organisms or detritus are eaten whole or in pieces
digestion The process of breaking down food into molecules small enough for the body to absorb
absorption The uptake of small nutrient molecules by an organism's own body; the third main stage of food processing, following digestion
elimination The passing of undigested material out of the digestive compartment
peristalsis Rhythmic waves of contraction of smooth muscle that push food along the digestive tract
pyloric sphincter In the vertebrate digestive tract, a muscular ring that regulates the passage of food out of the stomach and into the small intestine
villi A fingerlike projection of the inner surface of the small intestin
microvilli One of many fine, fingerlike projections of the epithelial cells in the lumen of the small intestine that increase its surface area
kilocalorie A thousand calories; the amount of heat energy required to raise the temperature of 1 kg of water by 1°C
BMR The minimal number of kilocalories a resting animal requires to fuel itself for a given time
vitamin An organic molecule required in the diet in very small amounts
mineral In nutrition, a chemical element other than hydrogen, oxygen, or nitrogen that an organism requires for proper body functioning

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