Chapter 6 (Metabolism: Energy and Enzymes)

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Created by:

jmweiland Plus on October 4, 2010

Subjects:

honors biology, whitlock, mader

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This set deals with words from Chapter 6 (Metabolism: Energy and Enzymes)

Classes:

BIO 103 Crump, Walton APES

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Chapter 6 (Metabolism: Energy and Enzymes)

active site
region of the surface of an enzyme where the substrate binds and where the reaction occurs
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Terms

Definitions

active site region of the surface of an enzyme where the substrate binds and where the reaction occurs
ADP (adenosine diphsosphate) nucleotide with two phosphate groups that can accept another phosphate group and become ATP
ATP (adenosine triphosphate) nucleotide with three phosphate groups; the breakdown of ATP into ATP + P makes energy available for energy-requiring processes in cells
chemical energy energy associated with the interaction of atoms in a molecule
chemiosmosis ability of certain membranes to use a hydrogen ion gradient to drive ATP formation
coenzyme nonprotein organic molecule that aids the action of the enzyme to which it is loosely bound
cofactor nonprotein adjunct required by an enzyme in order to function; many are metal ions, others are coenzymes
competitive inhibition form of enzyme inhibition where the substrate and inhibitor are both able to bind to the enzyme's active site; each complexes with the enzyme; only when the substrate is at the active site will product form
coupled reactions reactions that occur simultaneously; one is an exzergonic reaction that releases energy, and the other is an endergonic reaction that requires an input of energy in order to occur
denatured loss of an enzyme's normal shape so that is no longer functions; caused by a less than optimal pH and temperature
electron transport chain passage of electrons along a series of membrane-bound electron carrier molecules from a higher to lower energy level; the energy released is used for the synthesis of ATP
endergonic reaction products have more free energy than reactants
energy capacity of do work and bring about change; occurs in a variety of forms
energy of activation energy that must be added in order for molecules to react with one another
entropy measure of disorder or randomness
enzyme organic catalyst, usually a protein, that speeds a reaction in cells due to its particular shape
enzyme inhibition means by which cells regulate enzyme activity; may be competitive or noncompetitive inhibition
exergonic reaction products have less free energy than reactants
feedback inhibition mechanism for regulating metabolic pathways in which the concentration of the product is kept within a certain range until binding at an allosteric site shuts down the pathway, and no more product is produced
free energy the amount of energy available to perform work
heat type of kinetic energy; captured solar energy eventually dissipates as heat in the environment
induced fit model change in the shape of an enzyme's active site that enhances the fit between the active site and its substrate(s)
kinetic energy energy that is actually doing work
law of conservation energy cannot be created or destroyed but can only be changed from one form to another
mechanical energy a type of kinetic energy, such as walking or running
metabolic pathway series of linked reactions, beginning with a particular reactant and terminating with an end product
metabolism all of the chemical reactions that occur in a cell during growth and repair
NAD+ (nicotinamide adenine dinucleotide) coenzyme of oxidation-reduction that accpets electrons and hydrogen ions to become NADH + H+ as oxidation of substrates occurs; during cellular respiration, it carrie electrons to the electron transport chain in mitochondria
NADP+ (nicotinamide adenine dinucleotide phosphate) coenzyme of oxidation-reduction that accepts electrons and hydrogen ions to become NADPH + H+; during photosynthesis it participates in the reduction of carbon dioxide to glucose
noncompetitive inhibition form of enzyme inhibition where the inhibitor binds to an enzyme at a location other than the active site; while at this site, the enzyme shape changes, the inhibitor is unable to bind to its substrate, and no product forms
oxidation loss of one or more electrons from an atom of molecule; in biological systems, generally the loss of hydrogen atoms
phosphorylation in metabolic processes, a way to activate an enzyme in which the enzyme either attaches an inorganic phosphate to a molecule or mediates the transfer of a phosphate group from one molecule to another
potential energy stored energy
product substance that forms as a result of a reaciton
reactant substance that participates in a reaction
reduction gain of electrons by an atom or molecule with a concurrent storage of energy; in biological systems, the electrons are accompanied by hydrogen ions
substrate reactant in a reaction controlled by an enzyme
vitamin essential requirement in the diet, needed in small amounts; often part of enzymes
Second law of thermodynamics energy cannot be changed from one form to another without a loss of usable energy
membrane sites where chemical reactions can occur in an orderly matter
Adenosine triphosphate high energy compound used to drive metabolic reactions
Adenosine diphosphate ATP is constantly being generated from
Adenosine + ribose = adenosine
in ADP, how many phosphate groups are there? three
During a coupled reaction, the bond joining a phosphate group is broken by hydrolysis
in the ATP cycle, the energy from exergonic reactions can be summed up by respiration
in the ATP cycle, the energy for endergonic reactions goes to do cellular work
chemical work energy needed to synthesize macromolecules
transport work energy needed to pump substances across plasma membrane
mechanical work energy needed to contract molecules, beat flagella, etc
lowering energy barriers enzymes speed up the cell's chemical reactions by
degradation enzyme complexes with a single substrate molecule; substrate is broken apart into two perfect molecules
synthesis enzyme complexes with two substrate molecules; substrates are joined together and released as single product molecule
1 substrate and 2 products in a hydrolysis type of reaction there are
2 substrates and 1 product in a dehydration type of reaction there are
substrate concentration enzyme activity increases with this; more collision between substrate molecules and the enzyme
temperature enzyme activity increases with this; too much can destroy them
pH most enzymes are optimized for a particular type of this
reversible enzyme inhibition when a substance known as an inhibitor binds to an enzyme and decreases its activity
competitive inhibitor takes the place of a substrate in the active site
noncompetitive inhibitor alters an enzyme's function by changing its shape
irreversible inhibition materials irreversibly inhibit an enzyme (known as poisons)
cyanides inhibit enzymes resulting in all ATP production
heavy metals irreversibly bind with many enzymes
nerve gas irreversibly inhibits enzymes required by nervous system
certain pesticides too toxic to insects because they inhibit key enzymes in the nervous system
many antibodies inhibit enzymes that are essential to the survival of disease-causing bacteria
penicillin inhibits an enzyme that bacteria use in making cell walls

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