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In an effort to determine the location of an operator site for a negatively regulated gene, you have made a series of deletions within the regulatory region. The extent of each deletion is shown by the line underneath the sequence, and the resulting expression from the operon (i = inducible; c = constitutive; - = no expression is also indicated).

. . . G G A T C T T A G C C G G C T A A C A T G A T A A A T A T A A . .

. . C C T A G A A T C G G C C G A T T G T A C T A T T T A T A T T . .

a. What can you conclude from these data about the location of the operator site?

b. Why do you think deletions 2 and 4 show no expression?

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a) From 1. deletion we can see that a small deletion in the operator is tolerable, and that those first few bases are not important for valid functions. From the constitutive mutants we see that that the region in the middle is of key importance for operator binding since without that region the negative regulator protein cannot bind to the operon. From the second constitutive mutant we can deduce that the part of the sequence in bold is probably the most important part of repressor binding:

CCTAGAATCGG\textbf{GAATCGG}CCGATTGTACTATTTATATT

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